Scan for motifs in candidate regions.

Scan for motifs in candidate regions.

find_motifs(object, ...)

# S3 method for SeuratPlus
find_motifs(object, pfm, genome, motif_tfs = NULL, verbose = TRUE)

Arguments

pfm	A PFMatrixList object with position weight matrices.
genome	A BSgenome object with the genome of interest.
motif_tfs	A data frame matching motifs with TFs. The first column is assumed to be the name of the motif, the second the name of the TF.
verbose	Display messages.

Value

A SeuratPlus object with updated motif info.